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Species belonging to selected taxon:
Arabidopsis thaliana
ABOUT THIS RECORD
ID:
MNEST047971
species:
Arabidopsis thaliana
source:
PMRD, original name:
ath-miRf10871-akr
Taxonomy by NCBI:
Arabidopsis thaliana
Arabidopsis
Brassicaceae
Brassicales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGGTGATGTCCTTTGCTCGACC
miRNA*
TCGAGTGGTTTGACATGATCAGG
mismatches:
5
bulges:
1
View larger
pre-miRNA
GAAGTGAAA
TGGTGATGTCCTTTGCTCGACC
CGGGGGTCGAGTGGCCTCTTGAGATCTTGAAGCTCCTACTCGACCACGGGG
TCGAGTGGTTTGACATGA
TCAGG
TCCGCTTC
dot-bracket secondary structure
(((((((..
((((.(((((..(..(((((((
(.(.(((((((((((.((..(....)..)).)))...)))))))).).)))
)))))..)...))))).)
)))..
).))))))
SIMILARITIES
miRBase
no hits
PMRD
ath-miRf10872-akr
:
6e-46
microPC
no hits
UniProt
no hits
RFAM
no hits
Identical with:
ath-miRf10872-akr
from PMRD (
MNEST047972
)
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction:
true miRNA
additional data
download this record